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  1. Journal Article Full text

    Coordination of Hepatitis C Virus Assembly by Distinct Regulatory Regions in Nonstructural Protein 5A

    Margarita Zayas; Gang Long; Vanesa Madan et al.

    PLOS Pathogens, Vol. 12 No. 1 · 2016 · English · PLOS Scopus

    Hepatitis C virus (HCV) nonstructural protein (NS)5A is a RNA-binding protein composed of a N-terminal membrane anchor, a structured domain I (DI) and two intrinsically disordered domains (DII and DIII) interacting with viral and cellular proteins. While DI and DII are essential for RNA…

  2. Journal Article Full text

    Population Genetics of the Rubber-Producing Russian Dandelion ( Taraxacum kok-saghyz )

    Edward V. McAssey; Ethan G. Gudger; Matthew P. Zuellig et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    The Russian dandelion, Taraxacum kok-saghyz (TKS), is a perennial species native to Central Asia that produces high quality, natural rubber. Despite its potential to help maintain a stable worldwide rubber supply, little is known about genetic variation in this species. To facilitate future…

  3. Journal Article Full text

    Regulation of Life Cycle Checkpoints and Developmental Activation of Infective Larvae in Strongyloides stercoralis by Dafachronic Acid

    Mennatallah M. Y. Albarqi; Jonathan D. Stoltzfus; Adeiye A. Pilgrim et al.

    PLOS Pathogens, Vol. 12 No. 1 · 2016 · English · PLOS Scopus

    The complex life cycle of the parasitic nematode Strongyloides stercoralis leads to either developmental arrest of infectious third-stage larvae (iL3) or growth to reproductive adults. In the free-living nematode Caenorhabditis elegans, analogous determination between dauer arrest and reproductive…

  4. Journal Article Full text

    A Highly Conserved Bacterial D-Serine Uptake System Links Host Metabolism and Virulence

    James P. R. Connolly; Mads Gabrielsen; Robert J. Goldstone et al.

    PLOS Pathogens, Vol. 12 No. 1 · 2016 · English · PLOS Scopus

    The ability of any organism to sense and respond to challenges presented in the environment is critically important for promoting or restricting colonization of specific sites. Recent work has demonstrated that the host metabolite D-serine has the ability to markedly influence the outcome of…

  5. Journal Article Full text

    Experimental Genome-Wide Determination of RNA Polyadenylation in Chlamydomonas reinhardtii

    Stephen A. Bell; Chi Shen; Alishea Brown et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    The polyadenylation of RNA is a near-universal feature of RNA metabolism in eukaryotes. This process has been studied in the model alga Chlamydomonas reinhardtii using low-throughput (gene-by-gene) and high-throughput (transcriptome sequencing) approaches that recovered poly(A)-containing sequence…

  6. Journal Article Full text

    Sexual Reproduction in Aspergillus flavus Sclerotia: Acquisition of Novel Alleles from Soil Populations and Uniparental Mitochondrial Inheritance

    Bruce W. Horn; Richard M. Gell; Rakhi Singh et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    Aspergillus flavus colonizes agricultural commodities worldwide and contaminates them with carcinogenic aflatoxins. The high genetic diversity of A. flavus populations is largely due to sexual reproduction characterized by the formation of ascospore-bearing ascocarps embedded within sclerotia. A…

  7. Journal Article Full text

    Clinical Validation of the 2005 ISUP Gleason Grading System in a Cohort of Intermediate and High Risk Men Undergoing Radical Prostatectomy

    Sheila F. Faraj; Stephania M. Bezerra; Kasra Yousefi et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    In 2005, the International Society of Urological Pathology (ISUP) introduced several modifications to the original Gleason system that were intended to enhance the prognostic power of Gleason score (GS). The objective of this study was to clinically validate the 2005 ISUP Gleason grading system for…

  8. Journal Article Full text

    Calcium Signaling Is Required for Erythroid Enucleation

    Christina B. Wölwer; Luke B. Pase; Sarah M. Russell et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    Although erythroid enucleation, the property of erythroblasts to expel their nucleus, has been known for 7ore than a century, surprisingly little is known regarding the molecular mechanisms governing this unique developmental process. Here we show that similar to cytokinesis, nuclear extrusion…

  9. Journal Article Full text

    Sex and Urbanicity Contribute to Variation in Lymphocyte Distribution across Ugandan Populations

    Prossy Naluyima; Leigh Anne Eller; Benson J. Ouma et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    Management of patient care and interpretation of research data require evaluation of laboratory results in the context of reference data from populations with known health status to adequately diagnose disease or make a physiological assessment. Few studies have addressed the diversity of…

  10. Journal Article Full text

    Outcome after Desensitization in HLA or ABO-Incompatible Kidney Transplant Recipients: A Single Center Experience

    Teresa Kauke; Sandra Klimaschewski; Ulf Schoenermarck et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    Background: The shortage of deceased donors led to an increase of living donor kidney (LDK) transplantations performed in the presence of donor-specific antibodies (DSA) or ABO incompatibility (ABOi) using various desensitization protocols. Methods: We herein analyzed 26 ABOi and 8 Luminex positive…

  11. Journal Article Full text

    Long-Term Effectiveness of a Lifestyle Intervention for the Primary Prevention of Type 2 Diabetes in a Low Socio-Economic Community – An Intervention Follow-Up Study on Reunion Island

    Adrian Fianu; Léa Bourse; Nadège Naty et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    In type 2 diabetes (T2D) prevention research, evidence for maintenance of risk factor reduction after three years of follow-up is needed. The objective of this study was to evaluate the long-term effectiveness of a combined lifestyle intervention aiming at controlling body weight (BW) and waist…

  12. Journal Article Full text

    Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome

    Loren A. Honaas; Eric K. Wafula; Norman J. Wickett et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    Whereas de novo assemblies of RNA-Seq data are being published for a growing number of species across the tree of life, there are currently no broadly accepted methods for evaluating such assemblies. Here we present a detailed comparison of 99 transcriptome assemblies, generated with 6 de novo…

  13. Journal Article Full text

    14-3-3β Promotes Migration and Invasion of Human Hepatocellular Carcinoma Cells by Modulating Expression of MMP2 and MMP9 through PI3K/Akt/NF-κB Pathway

    Yufu Tang; Pengfei Lv; Zhongyi Sun et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    14-3-3β has been demonstrated to possess the oncogenic potential, and its increased expression has been detected in multiple types of carcinomas. However, majority of previous studies focused on the role of 14-3-3β in tumor cell proliferation and apoptosis, leaving much to be elucidated about its…

  14. Journal Article Full text

    The Role of Individual Traits and Environmental Factors for Diet Composition of Sheep

    Atle Mysterud; Gunnar Austrheim

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    Large herbivore consumption of forage is known to affect vegetation composition and thereby ecosystem functions. It is thus important to understand how diet composition arises as a mixture of individual variation in preferences and environmental drivers of availability, but few studies have…

  15. Journal Article Full text

    Association between the AUC 0-24 /MIC Ratio of Vancomycin and Its Clinical Effectiveness: A Systematic Review and Meta-Analysis

    Peng Men; Hui-Bo Li; Suo-Di Zhai et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    Background: A target AUC0-24/MIC ratio of 400 has been associated with its clinical success when treating Staphylococcus aureus infections but is not currently supported by state-of-the-art evidence-based research. Objective: This current systematic review aimed to evaluate the available evidence…

  16. Journal Article Full text

    Neuro-Epigenetic Indications of Acute Stress Response in Humans: The Case of MicroRNA-29c

    Sharon Vaisvaser; Shira Modai; Luba Farberov et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    Stress research has progressively become more integrative in nature, seeking to unfold crucial relations between the different phenotypic levels of stress manifestations. This study sought to unravel stress-induced variations in expression of human microRNAs sampled in peripheral blood mononuclear…

  17. Journal Article Full text

    Vegetation and Climate Change during the Last Deglaciation in the Great Khingan Mountain, Northeastern China

    Jing Wu; Qiang Liu; Luo Wang et al.

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    The Great Khingan Mountain range, Northeast China, is located on the northern limit of modern East Asian Summer Monsoon (EASM) and thus highly sensitive to the extension of the EASM from glacial to interglacial modes. Here, we present a high-resolution pollen record covering the last glacial…

  18. Journal Article Full text

    Sexual Conflict and Gender Gap Effects: Associations between Social Context and Sex on Rated Attractiveness and Economic Status

    Amany Gouda-Vossos; Barnaby J. Dixson; Robert C. Brooks

    PLOS ONE, Vol. 11 No. 1 · 2016 · English · PLOS Scopus

    Human mate choice research often concerns sex differences in the importance of traits such as physical attractiveness and social status. A growing number of studies indicate that cues to social context, including other people who appear in stimulus photographs, can alter that individual’s…

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