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10 results for "Matthew Sims"

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  1. Journal Article

    Self-Concern Across Scales: A Biologically Inspired Direction for Embodied Artificial Intelligence

    Matthew Sims

    Frontiers in Neurorobotics, Vol. 16 · 2022 · English · DOAJ Scopus

    Intelligence in current AI research is measured according to designer-assigned tasks that lack any relevance for an agent itself. As such, tasks and their evaluation reveal a lot more about our intelligence than the possible intelligence of agents that we design and evaluate. As a possible first…

  2. Journal Article

    Vestibular neuritis caused by severe acute respiratory syndrome coronavirus 2 infection diagnosed by serology: Case report

    Alexandra Halalau; Madalina Halalau; Christopher Carpenter et al.

    SAGE Open Medical Case Reports, Vol. 9 · 2021 · English · DOAJ Scopus

    Vestibular neuritis is a disorder selectively affecting the vestibular portion of the eighth cranial nerve generally considered to be inflammatory in nature. There have been no reports of severe acute respiratory syndrome coronavirus 2 causing vestibular neuritis. We present the case of a…

  3. Journal Article

    New diagnostic methods for Escherichia marmotae and the first report of its identification in clinical isolates in North America

    Pelumi M. Oladipo; Robert J. Tibbetts; Audun Sivertsen et al.

    Frontiers in Microbiology, Vol. 16 · 2025 · English · DOAJ Scopus

    BackgroundGenomic sequences of E. marmotae and E. coli differ by 10%. Discovered as an environmental “cryptic clade” of Escherichia, E. marmotae also occurs in human infections. Microbiological and MALDI-TOF-MS methods frequently misidentify E. marmotae as E.coli. Our goal was to develop methods…

  4. Journal Article

    Integrated safety analysis of phase 3 studies for investigational microbiome therapeutic, SER-109, in recurrent CDI

    Matthew Sims; Charles Berenson; Stuart Cohen et al.

    Antimicrobial Stewardship & Healthcare Epidemiology, Vol. 3 · 2023 · English · DOAJ Scopus

    Background: Clostridioides difficile infection (CDI) often recurs in patients aged ≥65 years and those with comorbidities. Clinical trials often exclude patients with history of immunosuppression, malignancy, renal insufficiency, or other comorbidities. In a phase 3 trial (ECOSPOR III), SER-109 was…

  5. Journal Article

    Integrated efficacy analysis from phase 3 studies of investigational microbiome therapeutic, SER-109, in recurrent Clostridioides difficile infection

    Matthew Sims; Michael Silverman; Thomas Louie et al.

    Antimicrobial Stewardship & Healthcare Epidemiology, Vol. 3 · 2023 · English · DOAJ Scopus

    Background: Antibiotics alone are often insufficient to treat recurrent C. difficile infection (rCDI) because they have no activity against C. difficile spores that germinate within a disrupted microbiome. SER-109, an investigational, oral, microbiome therapeutic comprised of purified Firmicutes…

  6. Journal Article Full text

    SER-109, an Oral Microbiome Therapy for Recurrent Clostridioides difficile Infection

    Paul Feuerstadt; Thomas J. Louie; Bret Lashner et al.

    New England Journal of Medicine · 2022 · English · OpenAlex Scopus

    BACKGROUND: infection. METHODS: infection recurrence up to 8 weeks after treatment. Diagnosis by toxin testing was performed at trial entry, and randomization was stratified according to age and antibiotic agent received. Analyses of safety, microbiome engraftment, and metabolites were also…

  7. Journal Article Full text

    SER-109: An Oral Investigational Microbiome Therapeutic for Patients with Recurrent Clostridioides difficile Infection (rCDI)

    Sahil Khanna; Matthew Sims; Thomas J. Louie et al.

    Antibiotics, Vol. 11 No. 9 · 2022 · English · DOAJ Scopus

    Clostridioides difficile infection (CDI) is classified as an urgent health threat by the Centers for Disease Control and Prevention (CDC), and affects nearly 500,000 Americans annually. Approximately 20–25% of patients with a primary infection experience a recurrence, and the risk of recurrence…

  8. Journal Article

    Integrated Safety and Efficacy Analyses of Phase 3 Trials of a Microbiome Therapeutic for Recurrent CDI

    Colleen S. Kraft; Matthew Sims; Michael Silverman et al.

    Infectious Diseases and Therapy, Vol. 13 No. 10 · 2024 · English · DOAJ Scopus

    Abstract Introduction Recurrent Clostridioides difficile infection (rCDI) often occurs after standard-of-care antibiotics. VOWST oral spores (VOS, previously SER-109), an FDA-approved orally administered microbiome therapeutic, is indicated to prevent rCDI following antibiotics for rCDI. Objective…

  9. Journal Article

    Opportunities for RNA sequencing in physiology: from big data to understanding homeostasis and heterogeneity

    Jeremy W. Prokop; Stephanie M. Bilinovich; Ember Tokarski et al.

    Function, Vol. 7 No. 1 · 2026 · English · DOAJ Scopus

    The quantity of physiological data has grown exponentially, yielding insights into mechanisms of phenotypic and disease pathways. Among the powerful tools for physiological omics is the study of RNA, where broad sequencing of RNA leads to hypothesis generation and testing while providing…